Department of Mathematics,
University of California San Diego
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Final Defense
Alon Regev
UCSD
Filtered Algebraic Algebras
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AP&M 5829
AP&M 5829
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Department of Mathematics,
University of California San Diego
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Math 292 - Topology Seminar
Nicholas Nguyen
UCSD Graduate Student
Homotopy Groups of Spheres
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AP&M 7218
AP&M 7218
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Department of Mathematics,
University of California San Diego
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Center for Computational Mathematics Seminar
Michael Ferry
UCSD Graduate Student
Subspace Minimization Methods for Unconstrained Optimization
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AP&M 2402
AP&M 2402
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Department of Mathematics,
University of California San Diego
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Informal Seminar on Mathematics and Biochemistry-Biophysics
Bo Li
Department of Mathematics and CTBP, UCSD
Vriational implicit-solvent modeling and the level-set computation of biomolecular structures and interactions \\ Part I: An overview
Abstract:
Understanding biomolecules---their structures, dynamics, and
interactions with solvent---is essential to revealing mechanisms
and functions of biological systems. While atomistic simulations
that treat both solvent and solute molecules explicitly are usually
more accurate, implicit or continuum solvent models for biomolecules
are far more efficient. With an implicit solvent, the free energy
and structure of an underlying solvation system is described
through the solute particles and the interface that separates the
solutes and solvent.
Dzubiella, Swanson and McCammon [Phys. Rev. Lett.104, 527 (2006)
and J. Chem. Phys. 124, 084905 (2006)] developed a class of
variational implicit-solvent models. Central in these models is a
free-energy functional of all admissible solute-solvent interfaces,
coupling both nonpolar and polar contributions of an underlying
system. An energy-minimizing interface then defines an equilibrium
solute-solvent interface. Cheng et al. [J. Chem. Phys. 127, 084503
(2007)] developed a robust level-set method for numerically
capturing such interfaces.
In this talk, I will give an overview of the recent development
of variational implicit-solvent approach for solvation systems.
I will point out how various kinds of mathematical concepts and
techniques from differential geometry and partial differential
equations can be applied to this approach.
Joint work with Jianwei Che, Li-Tien Cheng, Joachim Dzubiella,
J. Andy McCammon, and Yang Xie.
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AP&M 5829
AP&M 5829
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Department of Mathematics,
University of California San Diego
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Food For Thought Seminar
Tom Petrillo
UCSD Graduate Student
Regular Graphs for Irregular Times
Abstract:
We will introduce regular graphs, and explore the eigenvalues associated to these graphs. We will then see what the eigenvalues of a graph tell us about its expansion. And, why this is actually interesting. Finally we will discuss irregular graphs and what statements we may make about their eigenvalues.
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AP&M B412
AP&M B412
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Department of Mathematics,
University of California San Diego
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Math 209 - Number Theory
Joel Bellaiche
Brandeis University
New examples of p-adically rigid automorphic forms
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AP&M 7321
AP&M 7321
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Department of Mathematics,
University of California San Diego
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Final Defense
Larissa Horn
UCSD Graduate Student
Fun with Tensor Products
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AP&M 6218
AP&M 6218
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